STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4166KEGG: ajs:Ajs_1411 putative secreted protein. (245 aa)    
Predicted Functional Partners:
Daci_4167
PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A1197 hypothetical protein.
 
     0.959
Daci_4170
KEGG: pla:Plav_3415 hypothetical protein.
 
     0.956
Daci_4169
KEGG: ajs:Ajs_1274 hypothetical protein.
 
     0.955
Daci_4168
KEGG: bxe:Bxe_A1196 hypothetical protein.
 
     0.954
Daci_4164
KEGG: ajs:Ajs_1279 putative secreted protein.
 
     0.944
Daci_4171
PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: har:HEAR2012 conserved hypothetical protein; putative signal peptide.
 
     0.900
Daci_4175
KEGG: ajs:Ajs_1402 putative secreted protein.
 
     0.891
Daci_4176
KEGG: har:HEAR2017 conserved hypothetical protein; putative signal peptide.
 
     0.891
Daci_4177
KEGG: rme:Rmet_2351 putative secreted protein.
 
     0.891
Daci_4178
KEGG: har:HEAR2019 conserved hypothetical protein; putative signal peptide.
 
     0.891
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.