Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4195KEGG: pna:Pnap_4257 protein kinase. (447 aa)    
Predicted Functional Partners:
Daci_4196
KEGG: pna:Pnap_4256 hypothetical protein.
 
   
 0.954
Daci_4194
SMART: AAA ATPase; KEGG: pna:Pnap_4258 superfamily I DNA and RNA helicases and helicase subunits-like protein.
 
     0.944
Daci_4203
PFAM: von Willebrand factor type A; KEGG: pna:Pnap_4255 von Willebrand factor, type A.
 
   
 0.818
Daci_4197
Hypothetical protein.
       0.799
Daci_4198
KEGG: hpy:HP0986 hypothetical protein.
       0.797
Daci_4192
Chromosome segregation ATPase-like protein; KEGG: hpy:HP0452 hypothetical protein.
 
     0.742
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.