STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4287PFAM: N-acetyltransferase; KEGG: cph:Cpha266_1973 N-acetyltransferase; Belongs to the arylamine N-acetyltransferase family. (264 aa)    
Predicted Functional Partners:
Daci_4286
PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mxa:MXAN_7072 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein.
       0.552
Daci_3089
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: hsa:84000 transmembrane protease, serine 13.
  
     0.522
Daci_5510
TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: hch:HCH_02779 rhs family protein.
  
     0.440
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.