STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4366KEGG: aav:Aave_3065 hypothetical protein. (261 aa)    
Predicted Functional Partners:
Daci_4365
PFAM: protein kinase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_3066 serine/threonine protein kinase.
       0.728
Daci_4367
KEGG: aav:Aave_3064 O-methyltransferase involved in polyketide biosynthesis-like protein.
       0.648
Daci_4368
PFAM: protein of unknown function DUF181; KEGG: aav:Aave_3061 protein of unknown function DUF181.
       0.648
Daci_4364
SMART: low molecular weight phosphotyrosine protein phosphatase; KEGG: pna:Pnap_2721 low molecular weight phosphotyrosine protein phosphatase.
       0.560
Daci_1886
PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_4220 alpha/beta hydrolase fold.
      
 0.530
Daci_3480
PFAM: peptidase S45 penicillin amidase; KEGG: aav:Aave_1140 peptidase S45, penicillin amidase.
      
 0.530
Daci_4369
PFAM: Forkhead-associated protein; KEGG: aav:Aave_3060 FHA domain containing protein.
       0.430
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.