STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4368PFAM: protein of unknown function DUF181; KEGG: aav:Aave_3061 protein of unknown function DUF181. (727 aa)    
Predicted Functional Partners:
Daci_4365
PFAM: protein kinase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_3066 serine/threonine protein kinase.
 
   
 0.840
Daci_4367
KEGG: aav:Aave_3064 O-methyltransferase involved in polyketide biosynthesis-like protein.
 
     0.814
Daci_0759
PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: ajs:Ajs_2361 ABC transporter related.
  
  
 0.732
Daci_4366
KEGG: aav:Aave_3065 hypothetical protein.
       0.648
Daci_3775
PFAM: Ricin B lectin; KEGG: sco:SCO7212 secreted glycosyl hydrolase.
  
     0.625
Daci_4369
PFAM: Forkhead-associated protein; KEGG: aav:Aave_3060 FHA domain containing protein.
 
     0.571
Daci_0345
PFAM: nitroreductase; KEGG: psb:Psyr_1566 nitroreductase.
  
  
 0.524
Daci_2312
PFAM: nitroreductase; KEGG: ajs:Ajs_1048 nitroreductase.
  
  
 0.524
Daci_2803
TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: pol:Bpro_2763 cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.524
Daci_3107
PFAM: nitroreductase; KEGG: hch:HCH_03586 nitroreductase.
  
  
 0.524
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.