STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4375KEGG: ppf:Pput_2741 GCN5-related N-acetyltransferase. (167 aa)    
Predicted Functional Partners:
Daci_3778
KEGG: aav:Aave_0646 UvrD/REP helicase.
  
     0.730
Daci_3687
PFAM: Propeptide PepSY amd peptidase M4; KEGG: prw:PsycPRwf_1922 propeptide, PepSY amd peptidase M4.
  
     0.665
Daci_5302
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_3303 endonuclease/exonuclease/phosphatase.
  
     0.598
Daci_5214
Hypothetical protein; KEGG: bbt:BBta_6747 putative resolvase (site-specific recombinase).
  
  
 0.568
Daci_4376
PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_6588 GCN5-related N-acetyltransferase.
  
 
 0.557
Daci_5522
KEGG: ajs:Ajs_0761 hypothetical protein.
  
     0.530
Daci_4749
KEGG: nmu:Nmul_A1825 L-lysine 6-monooxygenase (NADPH).
  
  
 0.508
Daci_3947
PFAM: integrase family protein; KEGG: pna:Pnap_4572 phage integrase; Belongs to the 'phage' integrase family.
  
     0.502
Daci_4600
PFAM: cobalt transport protein; KEGG: ajs:Ajs_2320 cobalt transport protein.
  
    0.485
Daci_5288
PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_3297 hypothetical protein.
  
    0.470
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.