STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4398PFAM: PRC-barrel domain protein; KEGG: bch:Bcen2424_5606 PRC-barrel domain protein. (135 aa)    
Predicted Functional Partners:
Daci_1971
PFAM: PRC-barrel domain protein; KEGG: sal:Sala_1396 PRC-barrel.
 
     0.546
mntP
Protein of unknown function DUF204; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
  
  
 0.510
Daci_4399
KEGG: bur:Bcep18194_B0749 hypothetical protein.
       0.451
Daci_0369
PFAM: CsbD family protein; KEGG: aav:Aave_0312 CsbD family protein; Belongs to the UPF0337 (CsbD) family.
 
     0.440
Daci_1311
KEGG: aav:Aave_4148 hypothetical protein.
  
     0.420
Daci_1933
KEGG: bbr:BB3510 phage-related hypothetical protein.
  
     0.408
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.