Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Daci_2338 | Daci_4399 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpd:BURPS668_1706 oxidoreductase, pyridine nucleotide-disulphide family. | KEGG: bur:Bcep18194_B0749 hypothetical protein. | 0.406 |
Daci_2353 | Daci_4399 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ccr:CC_3525 ferredoxin reductase. | KEGG: bur:Bcep18194_B0749 hypothetical protein. | 0.406 |
Daci_2775 | Daci_2776 | KEGG: ajs:Ajs_1084 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: ajs:Ajs_1085 cytochrome c oxidase, cbb3-type, subunit II. | 0.999 |
Daci_2775 | Daci_4399 | KEGG: ajs:Ajs_1084 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | KEGG: bur:Bcep18194_B0749 hypothetical protein. | 0.504 |
Daci_2776 | Daci_2775 | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: ajs:Ajs_1085 cytochrome c oxidase, cbb3-type, subunit II. | KEGG: ajs:Ajs_1084 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
Daci_2776 | Daci_4399 | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: ajs:Ajs_1085 cytochrome c oxidase, cbb3-type, subunit II. | KEGG: bur:Bcep18194_B0749 hypothetical protein. | 0.548 |
Daci_4398 | Daci_4399 | PFAM: PRC-barrel domain protein; KEGG: bch:Bcen2424_5606 PRC-barrel domain protein. | KEGG: bur:Bcep18194_B0749 hypothetical protein. | 0.451 |
Daci_4399 | Daci_2338 | KEGG: bur:Bcep18194_B0749 hypothetical protein. | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpd:BURPS668_1706 oxidoreductase, pyridine nucleotide-disulphide family. | 0.406 |
Daci_4399 | Daci_2353 | KEGG: bur:Bcep18194_B0749 hypothetical protein. | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ccr:CC_3525 ferredoxin reductase. | 0.406 |
Daci_4399 | Daci_2775 | KEGG: bur:Bcep18194_B0749 hypothetical protein. | KEGG: ajs:Ajs_1084 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.504 |
Daci_4399 | Daci_2776 | KEGG: bur:Bcep18194_B0749 hypothetical protein. | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: ajs:Ajs_1085 cytochrome c oxidase, cbb3-type, subunit II. | 0.548 |
Daci_4399 | Daci_4398 | KEGG: bur:Bcep18194_B0749 hypothetical protein. | PFAM: PRC-barrel domain protein; KEGG: bch:Bcen2424_5606 PRC-barrel domain protein. | 0.451 |