STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4422PFAM: protein of unknown function DUF344; KEGG: vei:Veis_1774 protein of unknown function DUF344. (338 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.956
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
    
 0.914
corA-2
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
     0.684
Daci_4919
PFAM: Ppx/GppA phosphatase; KEGG: aav:Aave_2625 Ppx/GppA phosphatase.
 
 
 0.646
Daci_4005
PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_2243 radical SAM N-terminal domain protein.
   
    0.623
Daci_0979
PFAM: OmpW family protein; KEGG: aav:Aave_4566 OmpW family protein.
   
    0.504
Daci_4836
PFAM: OmpW family protein; OmpF family protein; KEGG: ajs:Ajs_2289 OmpW family protein.
   
    0.504
Daci_2449
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: aav:Aave_1527 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
    0.499
Daci_2779
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ajs:Ajs_1088 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
    0.499
Daci_4420
PFAM: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0608 extracellular solute-binding protein, family 3.
  
   0.478
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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