STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4508KEGG: hhe:HH1512 hypothetical protein. (422 aa)    
Predicted Functional Partners:
Daci_4507
KEGG: wsu:WS1830 hypothetical protein.
 
     0.946
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
   
 
 0.829
Daci_4393
PFAM: metallophosphoesterase; KEGG: ilo:IL0118 calcineurin-like phosphoesterase.
 
   
 0.731
Daci_4506
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mbb:BCG_1717 putative acyl-CoA dehydrogenase fadE16.
 
     0.692
Daci_2598
KEGG: oan:Oant_1495 virulence-associated protein.
  
     0.661
Daci_2632
KEGG: oan:Oant_1495 virulence-associated protein.
  
     0.661
Daci_3219
KEGG: mms:mma_2209 hypothetical protein.
  
     0.530
Daci_2560
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ajs:Ajs_1649 protein of unknown function DUF395, YeeE/YedE.
  
  
 0.489
Daci_5150
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mms:mma_0255 hypothetical protein.
  
  
 0.489
Daci_2659
KEGG: ajs:Ajs_1106 hypothetical protein.
  
 
   0.473
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.