Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4528PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4515 ABC transporter-related protein. (268 aa)    
Predicted Functional Partners:
Daci_4527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4514 binding-protein-dependent transport systems inner membrane component.
 
 0.941
Daci_4526
PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_4513 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
 
 
 0.838
Daci_5822
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_2932 probable permease of ABC transporter.
 
 
 0.799
Daci_2376
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2146 nitrate ABC transporter, inner membrane subunit.
 
 
 0.786
Daci_0146
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component.
 
 
 0.782
Daci_4529
PFAM: acyl-CoA reductase; KEGG: aav:Aave_4516 putative acyl-CoA reductase.
       0.773
Daci_4530
KEGG: aav:Aave_4517 putative acyl protein synthase/acyl-CoA reductase-like protein.
       0.773
Daci_1140
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1091 binding-protein-dependent transport systems inner membrane component.
 
 
 0.759
Daci_5618
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1867 ABC-type sulfonate transporter, permease component.
 
 
 0.712
Daci_2377
KEGG: ajs:Ajs_2831 twin-arginine translocation pathway signal.
 
 0.706
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.