STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4529PFAM: acyl-CoA reductase; KEGG: aav:Aave_4516 putative acyl-CoA reductase. (498 aa)    
Predicted Functional Partners:
Daci_4530
KEGG: aav:Aave_4517 putative acyl protein synthase/acyl-CoA reductase-like protein.
 
 
 
 0.991
Daci_4527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4514 binding-protein-dependent transport systems inner membrane component.
 
     0.829
Daci_4526
PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_4513 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
 
     0.786
Daci_4528
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4515 ABC transporter-related protein.
       0.779
Daci_4525
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_4512 short-chain dehydrogenase/reductase SDR.
 
   0.748
Daci_5558
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ajs:Ajs_0741 glutamate synthase (ferredoxin).
  
  
 0.461
Daci_4531
Hypothetical protein.
       0.452
Daci_0984
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: vei:Veis_0068 myo-inositol catabolism IolB domain protein.
  
  
 0.427
Daci_4533
PFAM: regulatory protein TetR; KEGG: asa:ASA_3759 transcriptional regulator, TetR family.
 
     0.417
Daci_2931
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rso:RSc1239 putative acetolactate synthase protein; Belongs to the TPP enzyme family.
  
  
 0.401
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.