STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4534PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: nfa:nfa43000 putative esterase. (609 aa)    
Predicted Functional Partners:
Daci_4532
KEGG: aha:AHA_0552 transport protein.
       0.714
Daci_4533
PFAM: regulatory protein TetR; KEGG: asa:ASA_3759 transcriptional regulator, TetR family.
       0.714
Daci_2336
PFAM: regulatory protein LuxR; KEGG: rpb:RPB_1819 transcriptional regulator, LuxR family.
  
     0.676
Daci_5149
PFAM: Ankyrin; KEGG: bur:Bcep18194_B0772 hypothetical protein.
  
     0.641
Daci_5313
KEGG: hch:HCH_02671 hypothetical protein.
  
     0.572
Daci_4232
KEGG: rpa:RPA1061 possible polyketide synthesis protein.
  
     0.565
Daci_0285
KEGG: ppf:Pput_3076 hypothetical protein.
  
     0.564
Daci_2014
KEGG: vei:Veis_4644 porin, gram-negative type.
  
     0.534
Daci_4531
Hypothetical protein.
       0.490
Daci_3681
KEGG: esa:ESA_01915 hypothetical protein.
  
     0.486
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.