Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4537PFAM: amidohydrolase 2; KEGG: pna:Pnap_0606 amidohydrolase 2. (295 aa)    
Predicted Functional Partners:
Daci_4358
KEGG: pna:Pnap_1901 4-hydroxybenzoate 3-monooxygenase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
 
  
 0.671
Daci_2822
KEGG: rha:RHA1_ro05126 hypothetical protein; Belongs to the UPF0311 family.
 
  
 0.659
Daci_4538
PFAM: Tannase and feruloyl esterase; KEGG: bam:Bamb_4911 feruloyl esterase.
 
     0.594
Daci_4442
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1656 xylose isomerase domain protein TIM barrel.
 
     0.531
Daci_4536
PFAM: regulatory protein MarR; KEGG: pna:Pnap_0603 transcriptional regulator, MarR family.
 
     0.475
Daci_0909
PFAM: Carboxymuconolactone decarboxylase; KEGG: mpt:Mpe_A3531 hydrolase or acyltransferase-like protein.
 
     0.441
Daci_3506
PFAM: nucleoside recognition domain protein; KEGG: pfl:PFL_0096 nucleoside transporter.
   
    0.415
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.