STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4537PFAM: amidohydrolase 2; KEGG: pna:Pnap_0606 amidohydrolase 2. (295 aa)    
Predicted Functional Partners:
Daci_4358
KEGG: pna:Pnap_1901 4-hydroxybenzoate 3-monooxygenase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
 
  
 0.673
Daci_2822
KEGG: rha:RHA1_ro05126 hypothetical protein; Belongs to the UPF0311 family.
 
  
 0.657
Daci_4538
PFAM: Tannase and feruloyl esterase; KEGG: bam:Bamb_4911 feruloyl esterase.
 
     0.594
Daci_4442
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1656 xylose isomerase domain protein TIM barrel.
 
     0.532
Daci_4536
PFAM: regulatory protein MarR; KEGG: pna:Pnap_0603 transcriptional regulator, MarR family.
 
     0.475
Daci_0909
PFAM: Carboxymuconolactone decarboxylase; KEGG: mpt:Mpe_A3531 hydrolase or acyltransferase-like protein.
 
     0.441
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
  
 0.423
Daci_4540
PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0604 uncharacterized protein UPF0065.
 
     0.408
Daci_4753
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase.
     
 0.405
Daci_3506
PFAM: nucleoside recognition domain protein; KEGG: pfl:PFL_0096 nucleoside transporter.
   
    0.402
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.