STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4628KEGG: aav:Aave_3317 hypothetical protein. (142 aa)    
Predicted Functional Partners:
Daci_0053
KEGG: ajs:Ajs_0032 methyltransferase type 12.
  
     0.755
Daci_0622
PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_3839 putative signal transduction protein.
  
     0.717
Daci_0601
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.681
Daci_3594
PFAM: CheW domain protein; KEGG: mpt:Mpe_A2970 hypothetical protein.
  
     0.622
Daci_4627
PFAM: protein of unknown function UPF0005; KEGG: aav:Aave_3316 protein of unknown function UPF0005; Belongs to the BI1 family.
       0.613
Daci_2847
KEGG: ajs:Ajs_3158 hypothetical protein.
 
     0.557
Daci_0598
PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: aav:Aave_4414 GTP-binding signal recognition particle SRP54, G-domain.
  
     0.543
Daci_2084
ErfK/YbiS/YcfS/YnhG; KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG.
  
     0.536
Daci_2035
PFAM: Sporulation domain protein; KEGG: aav:Aave_3575 sporulation domain protein.
  
     0.531
Daci_0634
SAF domain; KEGG: aav:Aave_4419 SAF domain.
  
     0.520
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.