Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4679KEGG: nar:Saro_0657 hypothetical protein. (222 aa)    
Predicted Functional Partners:
Daci_4680
Hypothetical protein.
       0.757
Daci_4681
KEGG: pna:Pnap_2251 hypothetical protein.
       0.757
Daci_4682
KEGG: pna:Pnap_2252 putative RecA/RadA recombinase.
       0.716
Daci_4676
Hypothetical protein; KEGG: aav:Aave_1782 prophage tail length tape measure.
 
     0.687
Daci_4678
Hypothetical protein.
       0.672
Daci_4677
KEGG: nar:Saro_0659 hypothetical protein.
       0.669
Daci_4675
Hypothetical protein; KEGG: aav:Aave_1783 carbohydrate-binding family V/XII.
       0.644
Daci_4670
PFAM: glycoside hydrolase family 24; KEGG: aav:Aave_1729 putative endolysin (lysis protein) (lysozyme).
       0.635
Daci_4671
Hypothetical protein.
       0.635
Daci_4672
KEGG: aav:Aave_2373 hypothetical protein.
       0.635
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.