Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_4743PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_1607 extracellular solute-binding protein, family 1. (348 aa)    
Predicted Functional Partners:
Daci_1589
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0914 binding-protein-dependent transport systems inner membrane component.
 
 
 0.988
Daci_1588
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0913 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
 
 0.958
Daci_1284
TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_03086 ABC-type Fe3+ transport system, permease component.
 
 
 0.929
Daci_1282
TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: reh:H16_B0111 ABC-type transporter, periplasmic component: BIT family.
  
  
0.922
Daci_4800
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1452 probable permease component of ABC transporter.
 
 
 0.920
Daci_4801
PFAM: extracellular solute-binding protein family 1; KEGG: bbr:BB1453 putative regulatory lipoprotein.
     
 0.909
Daci_1283
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smd:Smed_4878 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.884
Daci_1133
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01887 putative ABC transporter substrate binding protein.
 
 
 0.876
Daci_4799
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1451 probable ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.874
Daci_1525
KEGG: aav:Aave_1925 putative iron-regulated protein.
  
    0.870
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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