STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4782KEGG: aav:Aave_1853 hypothetical protein. (221 aa)    
Predicted Functional Partners:
Daci_4781
PFAM: protein of unknown function DUF520; KEGG: ajs:Ajs_2750 protein of unknown function DUF520; Belongs to the UPF0234 family.
       0.778
Daci_4783
KEGG: aav:Aave_1852 putative metal dependent phosphohydrolase.
 
     0.717
Daci_1458
KEGG: vei:Veis_4558 hypothetical protein.
  
     0.678
Daci_1574
PFAM: CheW domain protein; KEGG: ajs:Ajs_3576 putative CheW protein.
  
     0.646
Daci_5428
KEGG: ajs:Ajs_0900 hypothetical protein.
  
     0.626
Daci_0865
PFAM: Forkhead-associated protein; KEGG: aav:Aave_4680 FHA domain containing protein.
  
     0.597
Daci_5580
PFAM: Fimbrial assembly family protein; KEGG: ajs:Ajs_0731 fimbrial assembly family protein.
  
     0.583
Daci_1576
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: vei:Veis_3017 CheA signal transduction histidine kinases.
  
     0.580
Daci_5578
PFAM: Pilus assembly protein PilP; KEGG: aav:Aave_0999 pilus assembly protein, PilQ.
  
     0.578
Daci_0836
KEGG: ajs:Ajs_4003 hypothetical protein.
  
     0.575
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.