STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4783KEGG: aav:Aave_1852 putative metal dependent phosphohydrolase. (329 aa)    
Predicted Functional Partners:
Daci_4782
KEGG: aav:Aave_1853 hypothetical protein.
 
     0.717
Daci_3375
PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_1708 putative signal transduction protein.
 
   0.703
Daci_2381
KEGG: vei:Veis_1656 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.650
Daci_4781
PFAM: protein of unknown function DUF520; KEGG: ajs:Ajs_2750 protein of unknown function DUF520; Belongs to the UPF0234 family.
       0.631
Daci_2904
KEGG: aav:Aave_1802 hypothetical protein.
  
    0.603
Daci_5115
Diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_0990 diguanylate phosphodiesterase.
  
     0.589
Daci_0899
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2324 methyltransferase type 11.
  
     0.571
Daci_5114
Diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: aav:Aave_1316 diguanylate phosphodiesterase.
  
     0.535
Daci_5063
KEGG: aav:Aave_1383 hypothetical protein.
 
     0.496
Daci_2130
PFAM: regulatory protein Crp; KEGG: ajs:Ajs_3105 putative transcriptional regulator, Crp/Fnr family.
  
     0.475
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.