STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4835KEGG: aav:Aave_3091 putative uncharacterized conserved protein. (412 aa)    
Predicted Functional Partners:
Daci_4834
PFAM: protein of unknown function DUF323; KEGG: aav:Aave_3090 protein of unknown function DUF323.
  
 0.997
hutH
KEGG: aav:Aave_2965 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
     
  0.900
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
  0.900
Daci_0661
PFAM: glutamine amidotransferase class-II; KEGG: aav:Aave_0403 glutamine amidotransferase, class-II.
  
  
 0.671
Daci_3969
KEGG: aav:Aave_2831 transglycosylase-associated protein.
   
    0.594
Daci_4833
Hypothetical protein.
       0.547
Daci_4346
KEGG: nar:Saro_3185 transglycosylase-associated protein.
   
    0.495
Daci_0748
KEGG: ajs:Ajs_0365 putative lipoprotein transmembrane.
 
  
 0.486
Daci_4836
PFAM: OmpW family protein; OmpF family protein; KEGG: ajs:Ajs_2289 OmpW family protein.
       0.467
Daci_5883
KEGG: pna:Pnap_1452 hypothetical protein.
  
  
 0.411
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.