STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4883KEGG: ajs:Ajs_1755 hypothetical protein. (224 aa)    
Predicted Functional Partners:
Daci_4882
PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_1756 aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
       0.762
Daci_4884
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vei:Veis_3005 short-chain dehydrogenase/reductase SDR.
       0.693
Daci_5088
PFAM: Methyltransferase type 11; KEGG: aav:Aave_1338 methyltransferase type 11.
  
     0.647
Daci_2855
PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_1587 alpha/beta hydrolase fold.
  
     0.574
Daci_5624
PFAM: protein of unknown function DUF6 transmembrane; KEGG: azo:azo0573 hypothetical protein.
  
     0.553
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.524
Daci_2557
PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1646 alpha/beta hydrolase fold.
  
     0.518
Daci_4881
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: aav:Aave_2665 transcriptional regulator, Crp/Fnr family.
       0.513
Daci_5162
KEGG: ajs:Ajs_3120 putative substrate-binding periplasmic (pbp) ABC transporter protein.
  
     0.429
Daci_2318
KEGG: aav:Aave_1283 putative substrate-binding periplasmic (pbp) ABC transporter protein.
  
     0.418
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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