STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4892PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_1075 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding. (749 aa)    
Predicted Functional Partners:
Daci_4893
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_1074 (2Fe-2S)-binding domain protein.
 
 0.978
Daci_5621
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:RL2499 putative isoquinoline 1-oxidoreductase alpha subunit.
 
 0.905
Daci_3931
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: spe:Spro_2492 (2Fe-2S)-binding domain protein.
 
 0.883
Daci_1854
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: aav:Aave_3926 (2Fe-2S)-binding domain protein.
 
 0.882
Daci_3170
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B1542 (2Fe-2S)-binding protein.
 
 
 0.845
Daci_2248
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: vei:Veis_4544 (2Fe-2S)-binding domain protein.
 
 0.825
Daci_2254
PFAM: protein of unknown function DUF182; KEGG: pol:Bpro_0572 protein of unknown function DUF182.
 
  
 0.788
Daci_3818
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:pRL120302 putative xanthine dehydrogenase YagT iron-sulfur binding subunit.
 
 0.784
Daci_4891
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: vha:VIBHAR_02787 hypothetical protein.
       0.645
Daci_4894
PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0482 outer membrane protein (porin).
       0.615
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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