STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4953PFAM: protein of unknown function DUF748; KEGG: ajs:Ajs_1662 protein of unknown function DUF748. (1281 aa)    
Predicted Functional Partners:
Daci_0382
PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein.
  
     0.645
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
    0.560
Daci_0370
KEGG: ajs:Ajs_0255 hypothetical protein.
  
  
 0.539
Daci_4952
KEGG: aav:Aave_2989 hypothetical protein.
       0.508
Daci_2229
PFAM: HemY domain protein; KEGG: aav:Aave_1996 HemY domain protein.
 
     0.488
Daci_4031
PFAM: protein of unknown function DUF1428; KEGG: rpe:RPE_4844 protein of unknown function DUF1428.
   
    0.461
Daci_5157
KEGG: ajs:Ajs_3116 secreted hydrolase-like protein.
 
     0.460
Daci_2519
KEGG: aav:Aave_3010 hypothetical protein.
  
     0.456
Daci_0829
PFAM: branched-chain amino acid transport; KEGG: ajs:Ajs_4055 branched-chain amino acid transport.
  
     0.432
Daci_2401
PFAM: acyltransferase 3; KEGG: ajs:Ajs_2806 acyltransferase 3.
  
     0.429
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.