STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4985PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0743 acetyltransferase, GNAT family. (174 aa)    
Predicted Functional Partners:
Daci_4987
PFAM: Tail Collar domain protein; KEGG: fjo:Fjoh_2683 phage tail collar domain protein.
 
     0.777
Daci_4988
PFAM: Tail Collar domain protein; KEGG: sus:Acid_0150 phage tail collar domain protein.
 
     0.777
Daci_4989
PFAM: Tail Collar domain protein; KEGG: mlo:mll4441 microcystin dependent protein MdpB.
 
     0.777
Daci_5801
PFAM: Tail Collar domain protein; KEGG: son:SO_0185 hypothetical microcystin dependent protein.
 
     0.777
Daci_5802
PFAM: Tail Collar domain protein; KEGG: aba:Acid345_2454 phage tail collar.
 
     0.777
Daci_5803
PFAM: Tail Collar domain protein; KEGG: mlo:mll4441 microcystin dependent protein MdpB.
 
     0.777
Daci_4984
KEGG: sus:Acid_0146 hypothetical protein.
       0.773
Daci_3190
PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: hch:HCH_06063 hypothetical protein.
  
     0.631
Daci_4749
KEGG: nmu:Nmul_A1825 L-lysine 6-monooxygenase (NADPH).
  
  
 0.508
Daci_4983
PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_2247 dihydrodipicolinate synthetase; Belongs to the DapA family.
       0.502
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.