STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_5008PFAM: phosphoribosyltransferase; KEGG: aav:Aave_1435 phosphoribosyltransferase. (174 aa)    
Predicted Functional Partners:
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.768
Daci_2423
KEGG: aav:Aave_2200 protein of unknown function DUF339.
  
     0.722
Daci_5004
KEGG: ajs:Ajs_1187 putative transmembrane protein.
 
     0.644
hisZ
tRNA synthetase class II (G H P and S); Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
       0.624
Daci_4910
KEGG: aav:Aave_2634 putative inner membrane transmembrane protein.
 
     0.622
Daci_2987
PFAM: Thioredoxin domain; KEGG: aav:Aave_3386 hypothetical protein.
  
     0.538
Daci_1839
KEGG: ajs:Ajs_3491 hypothetical protein.
  
     0.528
Daci_6032
KEGG: ajs:Ajs_4108 hypothetical protein.
  
     0.509
Daci_5003
PFAM: molybdopterin binding domain; KEGG: aav:Aave_1441 molybdopterin binding domain.
 
     0.499
Daci_1678
KEGG: aav:Aave_3904 putative transmembrane protein.
  
     0.493
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.