node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Daci_2322 | Daci_5026 | Daci_2322 | Daci_5026 | PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; Belongs to the UPF0307 family. | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.765 |
Daci_2322 | obg | Daci_2322 | Daci_5484 | PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; Belongs to the UPF0307 family. | GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.526 |
Daci_2322 | rplC | Daci_2322 | Daci_0391 | PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; Belongs to the UPF0307 family. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.534 |
Daci_2322 | rplM | Daci_2322 | Daci_5914 | PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; Belongs to the UPF0307 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.515 |
Daci_2322 | rplT | Daci_2322 | Daci_4613 | PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; Belongs to the UPF0307 family. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.499 |
Daci_2322 | rplU | Daci_2322 | Daci_5486 | PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; Belongs to the UPF0307 family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.520 |
Daci_5024 | Daci_5026 | Daci_5024 | Daci_5026 | Pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1419 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.789 |
Daci_5024 | Daci_5027 | Daci_5024 | Daci_5027 | Pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1419 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Peptidase M23B; PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: aav:Aave_1416 peptidase M23B. | 0.641 |
Daci_5024 | Daci_5028 | Daci_5024 | Daci_5028 | Pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1419 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | KEGG: aav:Aave_1415 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 0.596 |
Daci_5024 | obg | Daci_5024 | Daci_5484 | Pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1419 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.414 |
Daci_5026 | Daci_2322 | Daci_5026 | Daci_2322 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | PFAM: protein of unknown function DUF615; KEGG: aav:Aave_2078 protein of unknown function DUF615; Belongs to the UPF0307 family. | 0.765 |
Daci_5026 | Daci_5024 | Daci_5026 | Daci_5024 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aav:Aave_1419 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.789 |
Daci_5026 | Daci_5027 | Daci_5026 | Daci_5027 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Peptidase M23B; PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: aav:Aave_1416 peptidase M23B. | 0.853 |
Daci_5026 | Daci_5028 | Daci_5026 | Daci_5028 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | KEGG: aav:Aave_1415 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 0.843 |
Daci_5026 | mnmE | Daci_5026 | Daci_6055 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.797 |
Daci_5026 | obg | Daci_5026 | Daci_5484 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.942 |
Daci_5026 | rplC | Daci_5026 | Daci_0391 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.817 |
Daci_5026 | rplM | Daci_5026 | Daci_5914 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.789 |
Daci_5026 | rplT | Daci_5026 | Daci_4613 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.821 |
Daci_5026 | rplU | Daci_5026 | Daci_5486 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.815 |