STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_5059KEGG: ajs:Ajs_3145 putative transcriptional regulator. (101 aa)    
Predicted Functional Partners:
Daci_0307
PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: ajs:Ajs_0169 ProQ activator of osmoprotectant transporter ProP.
  
     0.761
Daci_4952
KEGG: aav:Aave_2989 hypothetical protein.
  
     0.751
Daci_0875
PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 transcriptional regulator, MarR family.
  
  
 0.730
Daci_1458
KEGG: vei:Veis_4558 hypothetical protein.
  
     0.675
Daci_1810
PFAM: response regulator receiver; KEGG: aav:Aave_3861 response regulator receiver protein.
  
    0.653
Daci_1657
PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 protein of unknown function DUF490.
  
     0.637
Daci_3951
KEGG: aav:Aave_2813 putative ferric uptake regulator, Fur family.
  
  
 0.636
Daci_3007
KEGG: ajs:Ajs_2549 hypothetical protein.
  
     0.623
Daci_5459
KEGG: aav:Aave_3642 hypothetical protein.
  
     0.623
Daci_4929
KEGG: ajs:Ajs_2388 hypothetical protein.
  
     0.621
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (22%) [HD]