Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_5062PFAM: Na+/solute symporter; KEGG: ajs:Ajs_2877 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (699 aa)    
Predicted Functional Partners:
Daci_5956
PFAM: protein of unknown function DUF485; KEGG: bur:Bcep18194_B1981 protein of unknown function DUF485.
 
  
 0.904
Daci_5063
KEGG: aav:Aave_1383 hypothetical protein.
 
    0.885
Daci_5960
PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pna:Pnap_0480 cyclic nucleotide-binding protein.
 
  
 0.777
Daci_5064
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
     
 0.753
Daci_5959
PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: pna:Pnap_0481 exonuclease, RNase T and DNA polymerase III.
 
    0.647
Daci_1266
KEGG: ajs:Ajs_0517 PGAP1 family protein.
  
    0.490
Daci_5065
Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
       0.477
Daci_3965
TIGRFAM: propionate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2016 propionate--CoA ligase.
 
  
 0.468
Daci_5061
KEGG: vei:Veis_2053 hypothetical protein.
       0.452
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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