STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_5068PFAM: Haemin-degrading family protein; KEGG: mfa:Mfla_1604 haemin-degrading. (374 aa)    
Predicted Functional Partners:
Daci_5070
TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_2194 TonB-dependent receptor.
 
  
 0.911
Daci_5069
KEGG: aav:Aave_1378 hypothetical protein.
       0.773
Daci_0118
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: oan:Oant_1901 siderophore-interacting protein.
 
  
 0.603
Daci_0138
TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: kpn:KPN_03087 outer membrane porin, receptor for ferric enterobactin and colicins B and D.
 
  
 0.577
Daci_0313
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: reh:H16_B1184 siderophore-interacting protein.
  
  
 0.534
Daci_3790
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0998 Fe uptake system permease.
   
 0.491
Daci_1008
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_3854 putative iron ABC transporter, ATP-binding protein.
 
   
 0.489
Daci_3149
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_3622 ferric enterobactin transport protein FepC PA4158.
   
 0.484
Daci_2794
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2362 ABC transporter related.
   
 0.471
Daci_5750
PFAM: transport system permease protein; KEGG: mes:Meso_1443 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.471
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.