STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_5073Bacterioferritin; Iron-storage protein. (158 aa)    
Predicted Functional Partners:
Daci_0888
PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: aav:Aave_3866 ferritin, Dps family protein.
  
  
  0.912
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.912
Daci_2757
Bacterioferritin; Iron-storage protein.
  
  
 
0.912
Daci_4621
KEGG: aav:Aave_3310 BFD domain protein (2Fe-2S)-binding domain protein.
  
 
 0.757
Daci_3831
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: aav:Aave_3996 multi-sensor hybrid histidine kinase.
   
  
 0.682
Daci_4759
PFAM: Thioesterase; KEGG: nmu:Nmul_A1834 thioesterase.
      
 0.554
Daci_1458
KEGG: vei:Veis_4558 hypothetical protein.
   
  
 0.470
Daci_4410
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aav:Aave_2971 anti-sigma-factor antagonist.
   
  
 0.470
Daci_4411
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aav:Aave_2970 anti-sigma-factor antagonist.
   
  
 0.470
Daci_1297
PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM.
  
    0.441
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.