Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_5074Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: noc:Noc_1167 signal transduction histidine kinase. (432 aa)    
Predicted Functional Partners:
Daci_1508
KEGG: mgm:Mmc1_3409 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.839
Daci_5981
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4361 integral membrane sensor hybrid histidine kinase.
 
 
 
 0.800
Daci_1873
PFAM: response regulator receiver; KEGG: aav:Aave_2238 response regulator receiver protein.
 
 
 0.788
Daci_5902
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0637 histidine kinase.
 
 
 
 0.785
Daci_0735
KEGG: aav:Aave_2236 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 
 0.784
Daci_1871
KEGG: aav:Aave_2236 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 
 0.783
Daci_0738
PFAM: response regulator receiver; KEGG: aav:Aave_2238 response regulator receiver protein.
 
 
 0.770
Daci_4347
Hypothetical protein; KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase.
   
 
 0.768
Daci_1573
PFAM: response regulator receiver; KEGG: ajs:Ajs_3577 response regulator receiver protein.
 
 
 0.752
Daci_3828
PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3993 response regulator receiver sensor signal transduction histidine kinase.
 
 
 
 0.731
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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