Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Dshi_0738 | Dshi_0968 | Dshi_0738 | Dshi_0968 | Conserved hypothetical protein. | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | 0.473 |
| Dshi_0738 | gltB | Dshi_0738 | Dshi_0002 | Conserved hypothetical protein. | Glutamate synthase; PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase KEGG: sit:TM1040_2823 glutamate synthase (ferredoxin), involved in nitrogen metabolism PATH: rn00910. | 0.459 |
| Dshi_0960 | Dshi_0964 | Dshi_0960 | Dshi_0964 | Transcriptional regulator; N-terminal HTH region, C-terminal FCD effector binding domain; GntR family. | Hypothetical protein. | 0.560 |
| Dshi_0960 | Dshi_0968 | Dshi_0960 | Dshi_0968 | Transcriptional regulator; N-terminal HTH region, C-terminal FCD effector binding domain; GntR family. | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | 0.592 |
| Dshi_0961 | Dshi_0964 | Dshi_0961 | Dshi_0964 | Catechol dioxygenase domain protein; C-terminal domain is missing, probable pseudogene. | Hypothetical protein. | 0.581 |
| Dshi_0961 | Dshi_0968 | Dshi_0961 | Dshi_0968 | Catechol dioxygenase domain protein; C-terminal domain is missing, probable pseudogene. | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | 0.693 |
| Dshi_0964 | Dshi_0960 | Dshi_0964 | Dshi_0960 | Hypothetical protein. | Transcriptional regulator; N-terminal HTH region, C-terminal FCD effector binding domain; GntR family. | 0.560 |
| Dshi_0964 | Dshi_0961 | Dshi_0964 | Dshi_0961 | Hypothetical protein. | Catechol dioxygenase domain protein; C-terminal domain is missing, probable pseudogene. | 0.581 |
| Dshi_0964 | Dshi_0968 | Dshi_0964 | Dshi_0968 | Hypothetical protein. | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | 0.746 |
| Dshi_0967 | Dshi_0968 | Dshi_0967 | Dshi_0968 | Fumarylacetoacetate (FAA) hydrolase; FAA is the last enzyme in the tyrosine catabolic pathway. | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | 0.700 |
| Dshi_0968 | Dshi_0738 | Dshi_0968 | Dshi_0738 | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | Conserved hypothetical protein. | 0.473 |
| Dshi_0968 | Dshi_0960 | Dshi_0968 | Dshi_0960 | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | Transcriptional regulator; N-terminal HTH region, C-terminal FCD effector binding domain; GntR family. | 0.592 |
| Dshi_0968 | Dshi_0961 | Dshi_0968 | Dshi_0961 | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | Catechol dioxygenase domain protein; C-terminal domain is missing, probable pseudogene. | 0.693 |
| Dshi_0968 | Dshi_0964 | Dshi_0968 | Dshi_0964 | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | Hypothetical protein. | 0.746 |
| Dshi_0968 | Dshi_0967 | Dshi_0968 | Dshi_0967 | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | Fumarylacetoacetate (FAA) hydrolase; FAA is the last enzyme in the tyrosine catabolic pathway. | 0.700 |
| Dshi_0968 | Dshi_2513 | Dshi_0968 | Dshi_2513 | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | KEGG: sil:SPO1770 hypothetical protein. | 0.409 |
| Dshi_0968 | gltB | Dshi_0968 | Dshi_0002 | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | Glutamate synthase; PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase KEGG: sit:TM1040_2823 glutamate synthase (ferredoxin), involved in nitrogen metabolism PATH: rn00910. | 0.459 |
| Dshi_2513 | Dshi_0968 | Dshi_2513 | Dshi_0968 | KEGG: sil:SPO1770 hypothetical protein. | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | 0.409 |
| gltB | Dshi_0738 | Dshi_0002 | Dshi_0738 | Glutamate synthase; PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase KEGG: sit:TM1040_2823 glutamate synthase (ferredoxin), involved in nitrogen metabolism PATH: rn00910. | Conserved hypothetical protein. | 0.459 |
| gltB | Dshi_0968 | Dshi_0002 | Dshi_0968 | Glutamate synthase; PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase KEGG: sit:TM1040_2823 glutamate synthase (ferredoxin), involved in nitrogen metabolism PATH: rn00910. | YCII-related; The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. | 0.459 |