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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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Dshi_2000SWISSPROT P37387: D-xylose-binding periplasmic protein [Precursor]; TIGRFAM: TIGR02634 D-xylose ABC transporter, substrate-binding protein; COG: COG4213 - ABC-type xylose transport system, periplasmic component. (340 aa)    
Predicted Functional Partners:
xylH
SWISSPROT P0AGI4: Xylose transport system permease protein xylH; COG: COG4214 - ABC-type xylose transport system, permease component; PFAM: PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
Dshi_1998
SWISSPROT P04983: Ribose import ATP-binding protein rbsA; COG: COG1129 - ABC-type sugar transport system, ATPase component, ATPase components; PFAM: PF00005; PROSITE: PS50893; SMART: SM00382.
 
 0.980
Dshi_2002
Hypothetical protein; SUPERFAMILY: SSF69318.
 
     0.902
Dshi_2001
SWISSPROT Q44406: Xylose repressor xylR. The entry has no evidence at protein level, but the colocation with the xylose operon supports the annotation. COG: COG1940 - Transcriptional regulator/sugar kinase; PFAM: PF00480.
 
     0.874
xylA
Xylose isomerase; PROSITE: PS00172, PS00173; PFAM: PF01261; SWISSPROT Q3IYM4: Xylose isomerase; TIGRFAM: TIGR02630; COG: COG2115; Belongs to the xylose isomerase family.
 
  
 0.822
xylB2
SWISSPROT P09099: Xylose kinase; PFAM: PF00370, PF02782; TIGRFAM: TIGR01312 D-xylulose kinase; COG: COG1070 - Sugar (pentulose and hexulose) kinases.
 
   
 0.664
Dshi_2005
Putative cytochrome c peroxidase; PFAM: PF03150; Gene3D: G3DSA:1.10.760.10; PROSITE: PS51007.
  
     0.657
rbsB3
PFAM: periplasmic binding protein/LacI transcriptional regulator KEGG: sit:TM1040_0368 periplasmic binding protein/LacI transcriptional regulator; low swissprot hit to D-ribose-binding periplasmic protein precursor from Salmonella typhimurium and high Ref YP hit to periplasmic binding protein/LacI transcriptional regulator from Silicibacter sp. TM1040; NCBI conserved domains:rbsB.
 
  
 0.481
ugpB2
Sugar ABC transporter; PFAM: extracellular solute-binding protein family 1 KEGG: rde:RD1_4122 sugar ABC transporter, periplasmic sugar-binding protein, putative; periplasmic sugar-binding protein, putative.
   
  
 0.467
Dshi_2082
Putative sorbosone/glucose dehydrogenase; COG: COG2133 - Glucose/sorbosone dehydrogenases; SUPERFAMILY: Soluble quinoprotein glucose dehydrogenase; Gene3D: G3DSA:2.120.10.30.
   
    0.439
Your Current Organism:
Dinoroseobacter shibae
NCBI taxonomy Id: 398580
Other names: D. shibae DFL 12 = DSM 16493, Dinoroseobacter shibae DFL 12, Dinoroseobacter shibae DFL 12 = DSM 16493, Dinoroseobacter shibae DSM 16493, Dinoroseobacter shibae DSM 16493 = DFL 12, Jannaschia sp. DFL-12
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