STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v209789Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (176 aa)    
Predicted Functional Partners:
TGAM01_v204390
Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family.
  
 
0.931
TGAM01_v204092
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.
   
 0.926
TGAM01_v205439
Ubiquitin-like domain-containing protein.
   
 0.923
TGAM01_v205802
RING-box protein 1.
   
 0.899
TGAM01_v210625
Ubiquitin-like domain-containing protein.
   
 0.870
TGAM01_v208569
AN1-type domain-containing protein.
   
 0.870
TGAM01_v202635
Ubiquitin-40S ribosomal protein S27a.
    
 0.866
TGAM01_v205524
BZIP domain-containing protein.
    
 0.866
TGAM01_v205488
Ubiquitin-conjugating enzyme variant MMS2.
    
 0.861
TGAM01_v203852
Ubiquitin-activating enzyme E1 C.
  
 0.820
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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