STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v210062Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
TGAM01_v203306
Exosome complex component RRP4.
   
  0.723
TGAM01_v210992
RNase_PH domain-containing protein.
     
 0.626
TGAM01_v204961
RNase_PH domain-containing protein.
   
 
  0.624
TGAM01_v205227
RNase_PH domain-containing protein.
   
 
  0.622
TGAM01_v205130
Mitotic control protein dis3; Belongs to the RNR ribonuclease family.
     
 0.608
TGAM01_v204376
RNB domain-containing protein.
     
 0.608
TGAM01_v203727
RNA recognition domain-containing protein.
    
 
 0.589
TGAM01_v202444
AGC/PKA protein kinase.
    
  0.574
TGAM01_v209500
RNB domain-containing protein.
     
 0.563
TGAM01_v206172
Branchpoint-bridging protein.
   
 
 0.541
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.