STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v209825Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
TGAM01_v202444
AGC/PKA protein kinase.
   
  0.639
TGAM01_v201525
Mortality factor 4-like protein 1.
    
  0.494
TGAM01_v206782
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.490
TGAM01_v203669
Uncharacterized protein.
    
  0.490
TGAM01_v201566
RanBD1 domain-containing protein.
    
  0.490
TGAM01_v201412
Glutamyl-tRNA(Gln) amidotransferase.
    
  0.470
TGAM01_v205632
Uncharacterized protein.
    
  0.453
TGAM01_v201600
Rad60-SLD domain-containing protein.
    
  0.438
TGAM01_v202935
WSC domain-containing protein.
    
  0.437
TGAM01_v202058
CFEM domain-containing protein.
    
  0.437
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.