STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v207697Uncharacterized protein. (234 aa)    
Predicted Functional Partners:
TGAM01_v201749
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.674
TGAM01_v207133
Nucleoside diphosphate kinase; Belongs to the NDK family.
   
  0.638
TGAM01_v211012
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
  0.542
TGAM01_v208721
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
  0.542
TGAM01_v201354
Acyl-CoA desaturase.
    
  0.542
TGAM01_v205335
Transcription elongation factor B, polypeptide 1; Belongs to the SKP1 family.
    
  0.539
TGAM01_v205257
Galactokinase.
   
  0.535
TGAM01_v203234
Uncharacterized protein.
    
 0.517
TGAM01_v205575
CDC73_C domain-containing protein.
    
 0.517
TGAM01_v206432
Anaphase-promoting complex subunit 6.
    
 0.515
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.