STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v207725Glyco_hydro_cc domain-containing protein. (311 aa)    
Predicted Functional Partners:
TGAM01_v205358
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.705
TGAM01_v203235
Uncharacterized protein.
   
 0.705
TGAM01_v210711
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
     
  0.541
TGAM01_v205311
Ribonuclease P protein subunit.
     
  0.541
TGAM01_v200425
Uncharacterized protein.
     
  0.541
TGAM01_v210915
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
  0.528
TGAM01_v203909
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
  0.528
TGAM01_v204948
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
  0.528
TGAM01_v209120
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.526
TGAM01_v209030
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.526
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.