STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v207732Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (228 aa)    
Predicted Functional Partners:
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.999
TGAM01_v203697
Uncharacterized protein.
  
 
 0.999
TGAM01_v203785
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.999
TGAM01_v205026
60S ribosomal protein L5.
  
 
 0.999
TGAM01_v204993
50S ribosomal protein L26e.
  
 
 0.999
TGAM01_v200245
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 
 0.999
TGAM01_v204907
Ribosomal protein S16, mitochondrial.
  
 
 0.999
TGAM01_v205798
Ribosomal protein L23.
  
 
 0.999
TGAM01_v205698
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
TGAM01_v207255
60S ribosomal protein L35.
  
 
 0.999
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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