Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM01_v207729Stress responsive A/B barrel domain-containing protein. (118 aa)    
Predicted Functional Partners:
TGAM01_v204928
Tryptophan synthase.
    
 0.719
TGAM01_v203755
Methylenetetrahydrofolate dehydrogenase (NAD+).
    
 0.597
TGAM01_v204914
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.589
TGAM01_v208666
DASH complex subunit Dad4.
  
 0.587
TGAM01_v206879
Uncharacterized protein.
  
 0.587
TGAM01_v202760
DAO domain-containing protein.
  
 0.587
TGAM01_v204441
tRNA modification GTPase TrmE.
     
 0.586
TGAM01_v201105
Alanine-glyoxylate transaminase/(R)-3-amino-2-methylpropionate-pyruvate transaminase.
  
 
 0.582
TGAM01_v209708
Homocysteine S-methyltransferase.
   
 
 0.580
TGAM01_v206491
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
     
 0.571
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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