STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v204655Ent-kaurene oxidase. (599 aa)    
Predicted Functional Partners:
TGAM01_v204662
Nitrate nonutilizer-3.
    
 0.758
TGAM01_v208789
Conidial yellow pigment biosynthesis polyketide synthase.
  
 0.635
TGAM01_v204190
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.585
TGAM01_v200254
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.583
TGAM01_v204928
Tryptophan synthase.
    
 0.570
TGAM01_v207011
3'-5' exonuclease domain-containing protein.
    
  0.552
TGAM01_v208768
Uncharacterized protein.
    
 0.551
TGAM01_v202932
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.508
TGAM01_v201267
Delta(14)-sterol reductase.
    
 0.495
TGAM01_v209483
Delta24(24(1))-sterol reductase.
    
 0.495
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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