STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v204300Uncharacterized protein. (685 aa)    
Predicted Functional Partners:
TGAM01_v206980
Vesicle-associated membrane protein-associated protein B.
    
 
 0.719
TGAM01_v202422
MADS-box transcription factor, other eukaryote.
    
 0.673
TGAM01_v208199
Histone H2A; Belongs to the histone H2A family.
    
 0.673
TGAM01_v208729
Uncharacterized protein.
    
 0.665
TGAM01_v202879
FAS1 domain-containing protein.
    
 
 0.643
TGAM01_v202903
HDAC_interact domain-containing protein.
    
 
 0.643
TGAM01_v209196
Uncharacterized protein.
    
 0.636
TGAM01_v208137
Uncharacterized protein.
    
 0.636
TGAM01_v202512
TATA-box-binding protein.
    
 0.634
TGAM01_v210055
Uncharacterized protein.
    
 0.632
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.