STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM01_v201768Inner centromere protein. (1252 aa)    
Predicted Functional Partners:
TGAM01_v210800
Uncharacterized protein.
    
 
 0.933
TGAM01_v203077
Uncharacterized protein.
    
 0.842
TGAM01_v205575
CDC73_C domain-containing protein.
    
 0.838
TGAM01_v201004
Uncharacterized protein.
    
  0.780
TGAM01_v203167
Uncharacterized protein.
    
  0.780
TGAM01_v203272
Cell division cycle 14.
    
 
 0.752
TGAM01_v201229
Uncharacterized protein.
    
 
 0.729
TGAM01_v202120
Uncharacterized protein.
    
 
 0.689
TGAM01_v209480
Plus3 domain-containing protein.
    
 0.678
TGAM01_v200196
Tetratricopeptide repeat domain-containing protein.
    
 
 0.657
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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