STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB69832.1stearoyl-CoA 9-desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
ORB69833.1
stearoyl-CoA 9-desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
ORB63811.1
acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.828
ORB70001.1
3-ketosteroid-9-alpha-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.657
ORB71336.1
acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.627
ORB69264.1
acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.627
ORB69958.1
Electron transfer flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.600
ORB66611.1
Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.497
ORB69887.1
Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the long-chain O-acyltransferase family.
 
     0.494
ORB72302.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
ORB69834.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
Your Current Organism:
Mycobacterium shinjukuense
NCBI taxonomy Id: 398694
Other names: CCUG 53584, DSM 45663, JCM 14233, M. shinjukuense, Mycobacterium shinjukuense Saito et al. 2011, Mycobacterium sp. GTC2738, strain GTC 2738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.