STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48153.1Hypothetical protein; COG0208 Ribonucleotide reductase, beta subunit. (162 aa)    
Predicted Functional Partners:
EAQ48154.1
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.821
EAQ49220.1
Hypothetical protein; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis.
  
     0.680
EAQ51170.1
Hypothetical protein.
  
     0.656
rnc
Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.619
EAQ48350.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.618
EAQ49910.1
Hypothetical protein.
  
     0.598
EAQ48007.1
Hypothetical protein.
  
     0.580
EAQ48782.1
Hypothetical protein; COG1113 Gamma-aminobutyrate permease and related permeases.
  
     0.575
EAQ48998.1
COG0457 FOG: TPR repeat.
  
     0.575
EAQ49232.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.572
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.