STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48174.1Hypothetical protein. (363 aa)    
Predicted Functional Partners:
EAQ48175.1
COG4260 Putative virion core protein (lumpy skin disease virus).
 
  
 0.968
EAQ50110.1
Hypothetical protein; COG1512 Beta-propeller domains of methanol dehydrogenase type.
  
  
 0.726
EAQ48176.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
       0.482
EAQ48177.1
Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
       0.479
EAQ48014.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.467
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.