STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48190.1COG0659 Sulfate permease and related transporters (MFS superfamily). (530 aa)    
Predicted Functional Partners:
EAQ48189.1
Sulfate Permease; COG0288 Carbonic anhydrase.
 
 
 0.986
EAQ48910.1
COG0067 Glutamate synthase domain 1.
 
   
  0.883
EAQ48915.1
Hypothetical protein.
    
   0.787
EAQ49062.1
Hypothetical protein; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
   
   0.614
EAQ48535.1
Hypothetical protein; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
   
   0.614
sbcD
Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
   
   0.614
EAQ48862.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
    
   0.613
EAQ49360.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
    
   0.613
EAQ48443.1
Periplasmic protease; COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.
    
   0.613
EAQ51220.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
   0.613
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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