STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48209.1Putative nucleoside H+ symporter; COG0477 Permeases of the major facilitator superfamily. (410 aa)    
Predicted Functional Partners:
EAQ48210.1
Hypothetical protein; COG3622 Hydroxypyruvate isomerase.
 
    0.869
EAQ48205.1
Putative multi-domain protein.
 
     0.841
EAQ48206.1
Probable secreted glycosyl hydrolase.
 
     0.822
EAQ48211.1
Oxidoreductase, GMC family protein; COG2303 Choline dehydrogenase and related flavoproteins.
 
     0.822
EAQ48208.1
Oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
       0.795
EAQ48212.1
Hypothetical protein.
 
     0.752
EAQ48207.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
 
    0.685
EAQ49714.1
Hypothetical protein; COG3622 Hydroxypyruvate isomerase.
 
     0.648
EAQ48213.1
Probable glyoxylate-induced protein; COG3622 Hydroxypyruvate isomerase.
 
     0.619
EAQ48682.1
Hypothetical protein.
 
     0.619
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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