STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48248.1Peptidase, M23/M37 family protein; COG0739 Membrane proteins related to metalloendopeptidases. (399 aa)    
Predicted Functional Partners:
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.773
EAQ48246.1
Hypothetical protein.
       0.563
EAQ48247.1
COG3483 Tryptophan 2,3-dioxygenase (vermilion).
       0.563
EAQ48804.1
COG0739 Membrane proteins related to metalloendopeptidases.
  
     0.552
EAQ51467.1
COG5009 Membrane carboxypeptidase/penicillin-binding protein.
  
   
 0.530
pheS
phenylalanyl-tRNA synthetase alpha subunit; COG1286 Uncharacterized membrane protein, required for colicin V production.
 
     0.500
uppP
Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
    0.485
EAQ48250.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.461
EAQ51485.1
Putative peptidase; COG4942 Membrane-bound metallopeptidase.
  
   
 0.454
EAQ47838.1
Peptidoglycan-binding LysM; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
 
  0.452
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.