STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48317.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (738 aa)    
Predicted Functional Partners:
EAQ50387.1
Hypothetical protein; COG2971 Predicted N-acetylglucosamine kinase.
  
     0.606
EAQ48309.1
COG3201 Nicotinamide mononucleotide transporter.
 
    0.589
EAQ51468.1
Putative gliding motility protein.
  
     0.579
EAQ51057.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
   0.539
EAQ48310.1
Possible transcriptional regulatory protein nadr (probably AsnC-family protein); COG3172 Predicted ATPase/kinase involved in NAD metabolism.
 
     0.512
EAQ49565.1
COG3201 Nicotinamide mononucleotide transporter.
 
    0.500
EAQ51136.1
Hypothetical protein.
  
     0.470
EAQ49863.1
TonB.
   
   0.452
EAQ50876.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
   0.452
EAQ51132.1
TonB; COG2217 Cation transport ATPase.
   
   0.452
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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